MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
ACT.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 62
bases: 2,736,455 bps
CDS: 2,710
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,779
Total number of protein coding genes annotated/found:
2,710
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5014|JADGMB010000038.1
SEQF5014_02779
Genome Viewer
NA
AA
552/184
112899-112348
hypothetical protein
SEQF5014|JADGMB010000038.1
SEQF5014_02778
Genome Viewer
NA
AA
315/105
112031-112345
hypothetical protein
SEQF5014|JADGMB010000038.1
SEQF5014_02777
Genome Viewer
NA
AA
204/68
111959-111756
hypothetical protein
SEQF5014|JADGMB010000038.1
SEQF5014_02776
Genome Viewer
NA
AA
780/260
111722-110943
hypothetical protein
SEQF5014|JADGMB010000038.1
SEQF5014_02775
Genome Viewer
NA
AA
378/126
110875-110498
hypothetical protein
SEQF5014|JADGMB010000038.1
SEQF5014_02774
Genome Viewer
NA
AA
408/136
109771-110178
hypothetical protein
SEQF5014|JADGMB010000038.1
SEQF5014_02773
Genome Viewer
NA
AA
411/137
109660-109250
HTH-type transcriptional regulator LrpC
SEQF5014|JADGMB010000038.1
SEQF5014_02772
Genome Viewer
NA
AA
417/139
108674-109090
hypothetical protein
SEQF5014|JADGMB010000038.1
SEQF5014_02771
Genome Viewer
NA
AA
825/275
107762-108586
hypothetical protein
SEQF5014|JADGMB010000038.1
SEQF5014_02770
Genome Viewer
NA
AA
987/329
106718-107704
hypothetical protein
SEQF5014|JADGMB010000038.1
SEQF5014_02769
Genome Viewer
NA
AA
843/281
106620-105778
HTH-type transcriptional regulator CysL
SEQF5014|JADGMB010000038.1
SEQF5014_02768
Genome Viewer
NA
AA
609/203
105116-105724
Protease synthase and sporulation protein PAI 2
SEQF5014|JADGMB010000038.1
SEQF5014_02767
Genome Viewer
NA
AA
507/169
104597-105103
Spermidine/spermine N(1)-acetyltransferase
SEQF5014|JADGMB010000038.1
SEQF5014_02766
Genome Viewer
NA
AA
453/151
104128-104580
hypothetical protein
SEQF5014|JADGMB010000038.1
SEQF5014_02765
Genome Viewer
NA
AA
753/251
103031-103783
Pectin degradation repressor protein KdgR
SEQF5014|JADGMB010000038.1
SEQF5014_02764
Genome Viewer
NA
AA
633/211
102873-102241
KHG/KDPG aldolase
SEQF5014|JADGMB010000038.1
SEQF5014_02763
Genome Viewer
NA
AA
945/315
102225-101281
2-dehydro-3-deoxygluconokinase
SEQF5014|JADGMB010000038.1
SEQF5014_02762
Genome Viewer
NA
AA
1017/339
101264-100248
putative zinc-type alcohol dehydrogenase-like protein YjmD
SEQF5014|JADGMB010000038.1
SEQF5014_02761
Genome Viewer
NA
AA
1083/361
100235-99153
Mannonate dehydratase
SEQF5014|JADGMB010000038.1
SEQF5014_02760
Genome Viewer
NA
AA
834/278
99160-98327
putative oxidoreductase UxuB
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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